- Predicted Gene MLOC_57803
MLOC_57803 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.570228 | 0.16091 | 0.358816 | 0.371397 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.148505 | 0.134579 | 0.184734 |
| INF1 | Young developing inflorescences (5mm) | 3.29046 | 2.18445 | 4.05017 | 2.94623 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.8366 | 20.6413 | 21.3631 | 26.9782 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.662965 | 0.435109 | 0.373282 | 0.685332 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.101032 | 0.147511 | 0.0290393 | 0.49442 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.61133 | 1.85079 | 1.82435 | 2.06085 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.889535 | 1.12472 | 0.880742 | 2.58569 |
CDS Structure of MLOC_57803
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57803.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g06750.1 |
-2 |
3e-47 |
163 |
82/116 (71%) |
13106.m00697 protein OsMADS5 - MADS-box family gene with MIKCc type-box, expressed |
| TAIR PP10 |
AT5G15800.1 |
-2 |
3e-21 |
92 |
51/115 (44%) |
| Symbols: SEP1, AGL2 | K-box region and MADS-box transcription factor family protein | chr5:5151594-5153767 REVERSE LENGTH=251 |