MLOC_57802 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.398325.425456.121446.57453
LEAShoots from the seedlings (10 cm shoot stage)4.112545.178235.174554.41731
INF1Young developing inflorescences (5mm)7.13816.942626.63926.51819
INF2Developing inflorescences (1-1.5 cm)7.475226.228717.272398.44028
ROORoots from the seedlings (10 cm shoot stage)7.807795.845776.771738.27012
NODDeveloping tillers at six leaf stage, 3rd internode4.904925.409676.3919218.9236
CAR5Developing grain, bracts removed (5 DPA)6.35277.343996.606617.703
CAR15Developing grain, bracts removed (15 DPA)1.618042.183971.697314.99218



CDS Structure of MLOC_57802






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57802.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358645NoneNoneNoneNone
MLOC_57802.1CUST_18161_PI427708080AvailableAvailablecontig_42106 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06730.1 -3 5e-119 357 174/196 (89%) 13106.m00695 protein methyltransferase-like protein 5, putative, expressed
TAIR PP10 AT4G28830.1 -3 1e-96 298 145/192 (76%) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:14232490-14233917 FORWARD LENGTH=208