MLOC_5780 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_5780_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_5780_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.889811 | 0.619433 | 0.760229 | 0.854459 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.61278 | 0 | 0 | 0.547133 |
INF1 | Young developing inflorescences (5mm) | 0.0650009 | 0.278142 | 0.37549 | 0.295778 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.121282 | 0.3019 | 0.416333 | 0.381526 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.485 | 0.38769 | 0 | 0.868553 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.302477 | 0.240927 | 0.731413 | 0.89934 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.469061 | 0.495973 | 0.555736 | 0.616712 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0271401 | 0.0326764 | 0.0400541 | 0.100396 |
CDS Structure of MLOC_5780
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5780.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g38610.1 |
-3 |
4e-75 |
246 |
140/174 (80%) |
13112.m03980 protein lectin-like receptor kinase, putative, expressed |
TAIR PP10 |
AT3G55550.1 |
-3 |
3e-32 |
127 |
67/139 (48%) |
Concanavalin A-like lectin protein kinase family protein | chr3:20600019-20602073 REVERSE LENGTH=684 |