MLOC_57799 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.090157.782487.876857.12517
LEAShoots from the seedlings (10 cm shoot stage)9.135786.393417.961576.71277
INF1Young developing inflorescences (5mm)20.708919.882420.124616.4667
INF2Developing inflorescences (1-1.5 cm)19.775618.716718.075519.884
ROORoots from the seedlings (10 cm shoot stage)7.345768.158978.069479.37841
NODDeveloping tillers at six leaf stage, 3rd internode0.3231920.5052051.385282.14954
CAR5Developing grain, bracts removed (5 DPA)5.190735.748367.812325.6283
CAR15Developing grain, bracts removed (15 DPA)1.515730.9971571.091312.76206



CDS Structure of MLOC_57799






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57799.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57799.1CUST_13754_PI427708080AvailableAvailablecontig_42102 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g05220.2 -2 0.0 622 319/391 (82%) 13110.m00440 protein queuine tRNA-ribosyltransferase, putative, expressed
TAIR PP10None-----