MLOC_57797 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.138510.27188.83489.92107
LEAShoots from the seedlings (10 cm shoot stage)11.331211.010511.61669.04208
INF1Young developing inflorescences (5mm)8.834678.3040210.02667.9578
INF2Developing inflorescences (1-1.5 cm)11.249811.653412.194313.205
ROORoots from the seedlings (10 cm shoot stage)19.302211.226215.072714.0759
NODDeveloping tillers at six leaf stage, 3rd internode14.536114.007215.251440.088
CAR5Developing grain, bracts removed (5 DPA)13.037612.369313.823513.3399
CAR15Developing grain, bracts removed (15 DPA)4.310983.802373.834649.78745



CDS Structure of MLOC_57797






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57797.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251191.1NoneNoneNoneNone
MLOC_57797.2CUST_3827_PI427708080AvailableAvailablecontig_42102 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g58090.1 +3 2e-33 127 92/159 (58%) 13103.m06381 protein expressed protein
TAIR PP10None-----