- Predicted Gene MLOC_57784
MLOC_57784 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57784_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57784_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 9.84732 | 38.8419 | 31.5953 | 34.9918 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 45.6407 | 46.1537 | 34.4244 | 41.3747 |
INF1 | Young developing inflorescences (5mm) | 108.313 | 98.391 | 98.2333 | 92.4624 |
INF2 | Developing inflorescences (1-1.5 cm) | 147.747 | 130.509 | 127.508 | 166.524 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.35828 | 14.2301 | 13.5157 | 20.651 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.276 | 19.5909 | 19.2364 | 83.4981 |
CAR5 | Developing grain, bracts removed (5 DPA) | 58.5717 | 57.4968 | 64.8669 | 67.8728 |
CAR15 | Developing grain, bracts removed (15 DPA) | 28.2225 | 28.2448 | 26.5088 | 70.0241 |
CDS Structure of MLOC_57784
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57784.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g44390.1 |
-2 |
0.0 |
923 |
493/554 (89%) |
13112.m04698 protein RecF/RecN/SMC N terminal domain containing protein, expressed |
TAIR PP10 |
AT3G54670.3 |
-2 |
0.0 |
860 |
507/892 (57%) |
| Symbols: TTN8 | Structural maintenance of chromosomes (SMC) family protein | chr3:20235818-20243701 FORWARD LENGTH=1239 |