- Predicted Gene MLOC_57760
MLOC_57760 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57760_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57760_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 66.012 | 163.985 | 142.547 | 122.786 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 123.028 | 71.1784 | 61.8284 | 72.4849 |
INF1 | Young developing inflorescences (5mm) | 129.664 | 126.059 | 110.53 | 95.8757 |
INF2 | Developing inflorescences (1-1.5 cm) | 91.5728 | 104.348 | 90.8441 | 99.9841 |
ROO | Roots from the seedlings (10 cm shoot stage) | 58.9941 | 121.799 | 78.7032 | 121.89 |
NOD | Developing tillers at six leaf stage, 3rd internode | 79.8635 | 73.2557 | 37.9985 | 220.942 |
CAR5 | Developing grain, bracts removed (5 DPA) | 158.045 | 137.202 | 149.525 | 134.95 |
CAR15 | Developing grain, bracts removed (15 DPA) | 49.8823 | 44.8057 | 48.7934 | 99.0006 |
CDS Structure of MLOC_57760
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57760.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g01380.1 |
-1 |
0.0 |
3036 |
1601/1680 (95%) |
13111.m00048 protein clathrin heavy chain, putative, expressed |
TAIR PP10 |
AT3G11130.1 |
-1 |
0.0 |
2888 |
1499/1680 (89%) |
Clathrin, heavy chain | chr3:3482575-3491667 REVERSE LENGTH=1705 |