MLOC_57743 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains03.4689304.62049
LEAShoots from the seedlings (10 cm shoot stage)5.3427214.968920.002710.0575
INF1Young developing inflorescences (5mm)0.7877951.856891.615241.03668
INF2Developing inflorescences (1-1.5 cm)1.98092.637672.306752.31433
ROORoots from the seedlings (10 cm shoot stage)3.074261.127892.65781.79885
NODDeveloping tillers at six leaf stage, 3rd internode0.8893830.42149201.57279
CAR5Developing grain, bracts removed (5 DPA)00.4912470.290230.359885
CAR15Developing grain, bracts removed (15 DPA)0.255338000.944019



CDS Structure of MLOC_57743






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57743.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57743.1CUST_7952_PI427708083AvailableAvailablecontig_42050 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35660.1 +2 9e-19 83 44/64 (69%) 13107.m03651 protein TKL_IRAK_DUF26-lc.21 - DUF26 kinases have homology to DUF26 containing loci, expressed
TAIR PP10None-----