MLOC_5772 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 312.285 | 235.795 | 229.068 | 261.246 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 113.911 | 162.865 | 151.063 | 121.137 |
| INF1 | Young developing inflorescences (5mm) | 52.1797 | 64.4265 | 67.4289 | 53.7945 |
| INF2 | Developing inflorescences (1-1.5 cm) | 31.5118 | 29.3072 | 35.3249 | 36.4096 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 223.417 | 193.6 | 185.837 | 246.6 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 60.31 | 42.6405 | 39.0528 | 131.865 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 83.0177 | 95.472 | 85.8608 | 92.3953 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 52.9897 | 54.9115 | 49.4958 | 127.918 |
CDS Structure of MLOC_5772
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5772.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g42930.1 |
-2 |
7e-55 |
185 |
92/104 (88%) |
13104.m04249 protein OsGrx_C2.2 - glutaredoxin subgroup I, expressed |
| TAIR PP10 |
AT5G40370.1 |
-2 |
2e-42 |
149 |
73/98 (74%) |
Glutaredoxin family protein | chr5:16147826-16149052 REVERSE LENGTH=111 |
