- Predicted Gene MLOC_57719
MLOC_57719 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57719_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57719_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 52.7075 | 42.1684 | 39.4606 | 44.7303 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 80.1128 | 46.8334 | 80.3063 | 59.5783 |
INF1 | Young developing inflorescences (5mm) | 16.9484 | 12.7395 | 12.5609 | 12.2921 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.35608 | 7.16577 | 7.51779 | 7.38211 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.09407 | 5.12837 | 6.14182 | 5.83891 |
NOD | Developing tillers at six leaf stage, 3rd internode | 13.2798 | 22.8699 | 18.6536 | 68.8145 |
CAR5 | Developing grain, bracts removed (5 DPA) | 22.9836 | 26.5122 | 25.9291 | 25.5581 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.803356 | 0.603034 | 0.428054 | 1.57449 |
CDS Structure of MLOC_57719
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57719.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g60100.1 |
+1 |
3e-75 |
235 |
113/129 (88%) |
13103.m06597 protein 50S ribosomal protein L17, putative, expressed |
TAIR PP10 |
AT3G54210.1 |
+1 |
6e-70 |
221 |
108/125 (86%) |
Ribosomal protein L17 family protein | chr3:20067672-20068385 REVERSE LENGTH=211 |