- Predicted Gene MLOC_57715
MLOC_57715 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57715_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57715_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.03733 | 0.139133 | 0.131358 | 0.103316 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0627692 | 0.163287 | 0.0551219 | 0.0797896 |
INF1 | Young developing inflorescences (5mm) | 0.084999 | 0.0875894 | 0.0847444 | 0.0682245 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0863393 | 0.0671737 | 0.019367 | 0.0710875 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.134717 | 0.0381769 | 0.117183 | 0.0738648 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0154506 | 0.0703289 | 0.0774967 | 0.220878 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.6161 | 2.81866 | 3.2474 | 2.58436 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0553352 | 0.019273 | 0.0539837 | 0.0938998 |
CDS Structure of MLOC_57715
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57715.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g15020.2 |
+2 |
0.0 |
683 |
341/482 (71%) |
13101.m01663 protein lissencephaly type-1-like homology motif, putative, expressed |
TAIR PP10 |
AT3G16830.1 |
+2 |
5e-165 |
519 |
259/455 (57%) |
| Symbols: TPR2 | TOPLESS-related 2 | chr3:5731709-5737531 FORWARD LENGTH=1131 |