- Predicted Gene MLOC_57706
MLOC_57706 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 38.9851 | 36.2808 | 36.6953 | 37.804 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 61.3183 | 54.0953 | 64.4622 | 50.8776 |
| INF1 | Young developing inflorescences (5mm) | 23.3153 | 30.406 | 31.8328 | 24.4701 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.7875 | 28.7134 | 30.0306 | 31.4891 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 83.0589 | 88.7471 | 71.3291 | 103.73 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 265.223 | 248.344 | 191.4 | 773.603 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 24.6879 | 25.3503 | 22.1737 | 24.1824 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.6672 | 12.2521 | 10.5745 | 27.5644 |
CDS Structure of MLOC_57706
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57706.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g37420.1 |
+2 |
5e-130 |
377 |
183/192 (95%) |
13102.m04097 protein ras-related protein, putative, expressed |
| TAIR PP10 |
AT4G17170.1 |
+2 |
3e-126 |
367 |
180/189 (95%) |
| Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C, ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C | chr4:9644908-9646220 REVERSE LENGTH=211 |