- Predicted Gene MLOC_57705
MLOC_57705 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57705_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.57842 | 8.56386 | 6.92797 | 7.4007 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.55741 | 0.417567 | 0.799921 | 1.47071 |
INF1 | Young developing inflorescences (5mm) | 24.3644 | 24.8123 | 23.8149 | 20.897 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.1305 | 39.8949 | 31.9921 | 39.4189 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.96949 | 5.23168 | 3.97198 | 5.95037 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.257027 | 0.311574 | 0.45783 | 1.17078 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.98977 | 1.98434 | 2.42843 | 2.36093 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.53648 | 0.455464 | 2.2904 | 2.92532 |
CDS Structure of MLOC_57705
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57705.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g58960.1 |
-1 |
0.0 |
1580 |
846/1066 (79%) |
13104.m06211 protein regulator of chromosome condensation, putative, expressed |
TAIR PP10 |
AT5G42140.1 |
-1 |
0.0 |
1013 |
598/1098 (54%) |
Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain | chr5:16837547-16841640 REVERSE LENGTH=1073 |