- Predicted Gene MLOC_57700
MLOC_57700 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57700_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57700_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0 | 0.0975354 | 0.0487283 | 0.136036 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.241365 | 0 | 0.296228 |
INF1 | Young developing inflorescences (5mm) | 0.457411 | 0.422716 | 0.395795 | 0.413193 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.7535 | 7.79929 | 7.93093 | 11.1025 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.131031 | 0.033282 | 0.105073 | 0.0849401 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0819686 | 0.00908227 | 0.0483173 | 0.0727754 |
CAR5 | Developing grain, bracts removed (5 DPA) | 271.718 | 294.483 | 302.14 | 345.746 |
CAR15 | Developing grain, bracts removed (15 DPA) | 26.7706 | 28.772 | 27.1748 | 74.9408 |
CDS Structure of MLOC_57700
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57700.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g11414.2 |
+2 |
2e-136 |
396 |
213/274 (78%) |
13105.m01236 protein OsMADS58 - MADS-box family gene with MIKCc type-box, expressed |
TAIR PP10 |
AT4G18960.1 |
+2 |
2e-89 |
275 |
142/238 (60%) |
| Symbols: AG | K-box region and MADS-box transcription factor family protein | chr4:10383917-10388272 FORWARD LENGTH=252 |