MLOC_57698 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1903790.3720220.2619440.239065
LEAShoots from the seedlings (10 cm shoot stage)3.062454.75233.863482.6655
INF1Young developing inflorescences (5mm)000.04377230.00733989
INF2Developing inflorescences (1-1.5 cm)0.02636790.06316270.05652680.0427025
ROORoots from the seedlings (10 cm shoot stage)1.019970.8444580.935810.86699
NODDeveloping tillers at six leaf stage, 3rd internode0.4815130.137310.1270390.376501
CAR5Developing grain, bracts removed (5 DPA)00.04665610.01935610.017845
CAR15Developing grain, bracts removed (15 DPA)0.01892460.057128800.0559279



CDS Structure of MLOC_57698






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57698.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57698.2CUST_13732_PI427708080AvailableAvailablecontig_42000 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55420.1 -2 0.0 892 534/993 (54%) 13104.m05745 protein leucine-rich repeat family protein, putative, expressed
TAIR PP10 AT1G07390.1 -2 1e-118 399 312/936 (33%) | Symbols: AtRLP1, RLP1 | receptor like protein 1 | chr1:2269893-2274654 FORWARD LENGTH=1034