MLOC_57690 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.994361.884632.308282.21812
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.1254250.259780.2226660.246973
ROORoots from the seedlings (10 cm shoot stage)2.263471.619210.798771.77588
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0.0257134000.0237807
CAR15Developing grain, bracts removed (15 DPA)0.0175904000.0603508



CDS Structure of MLOC_57690






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57690.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364114NoneNoneNoneNone
MLOC_57690.1CUST_3807_PI427708080AvailableAvailablecontig_41994 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g04860.1 +1 1e-153 456 256/472 (54%) 13111.m00448 protein anthocyanin 5-O-glucosyltransferase, putative, expressed
TAIR PP10 AT4G15550.1 +1 8e-75 250 181/502 (36%) | Symbols: IAGLU | indole-3-acetate beta-D-glucosyltransferase | chr4:8877877-8879301 REVERSE LENGTH=474