MLOC_57678 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.035674300.0382826
CAR15Developing grain, bracts removed (15 DPA)14.96814.546316.529837.565



CDS Structure of MLOC_57678






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57678.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248452.1NoneNoneNoneNone
MLOC_57678.1CUST_3805_PI427708080AvailableAvailablecontig_41982 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06260.1 -2 0.0 530 251/353 (71%) 13106.m00641 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G45910.1 -2 1e-90 285 147/349 (42%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372