MLOC_57655 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.486890.524350.4017960.467512
LEAShoots from the seedlings (10 cm shoot stage)13.476821.931630.593715.8693
INF1Young developing inflorescences (5mm)0.09682110.1174120.3294890.160089
INF2Developing inflorescences (1-1.5 cm)00.06752490.1625450.121215
ROORoots from the seedlings (10 cm shoot stage)14.397411.20217.408311.2369
NODDeveloping tillers at six leaf stage, 3rd internode2.387791.178484.249524.09997
CAR5Developing grain, bracts removed (5 DPA)1.50572.52142.026372.01765
CAR15Developing grain, bracts removed (15 DPA)1.284291.845831.281523.78714



CDS Structure of MLOC_57655






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57655.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366348NoneNoneNoneNone
MLOC_57655.2CUST_13511_PI427708083AvailableAvailablecontig_419131 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g17100.1 +1 4e-47 109 61/98 (62%) 13104.m01550 protein heavy metal-associated domain containing protein, expressed
TAIR PP10 AT5G66110.1 +3 8e-42 97 46/55 (84%) | Symbols: HIPP27 | Heavy metal transport/detoxification superfamily protein | chr5:26430245-26430778 FORWARD LENGTH=147