MLOC_57646 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains60.230139.048246.010741.3767
LEAShoots from the seedlings (10 cm shoot stage)19.504415.948218.671813.5669
INF1Young developing inflorescences (5mm)37.062547.067649.104730.5184
INF2Developing inflorescences (1-1.5 cm)26.28730.262331.570827.4271
ROORoots from the seedlings (10 cm shoot stage)38.325540.024843.093641.3858
NODDeveloping tillers at six leaf stage, 3rd internode18.150520.098128.24761.6249
CAR5Developing grain, bracts removed (5 DPA)24.463824.914125.138520.212
CAR15Developing grain, bracts removed (15 DPA)8.802019.276948.6550517.4041



CDS Structure of MLOC_57646






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK250288.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250288.1CUST_18824_PI427708080NoneNoneNone
MLOC_1815.1NoneAvailableNonecontig_116147 (Mapped)
MLOC_31370.2NoneAvailableNonecontig_2182453 (Not mapped)
MLOC_41240.1NoneAvailableNonecontig_257924 (Mapped)
MLOC_57646.1NoneAvailableAvailablecontig_41958 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----