- Predicted Gene MLOC_57634
MLOC_57634 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57634_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57634_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 300.265 | 172.898 | 174.493 | 174.236 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 90.2046 | 51.7738 | 70.8179 | 49.1376 |
INF1 | Young developing inflorescences (5mm) | 251.315 | 239.491 | 259.196 | 176.517 |
INF2 | Developing inflorescences (1-1.5 cm) | 175.239 | 167.989 | 202.169 | 161.922 |
ROO | Roots from the seedlings (10 cm shoot stage) | 206 | 174.914 | 214.462 | 160.826 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.9153 | 12.9965 | 64.2535 | 51.1968 |
CAR5 | Developing grain, bracts removed (5 DPA) | 128.194 | 145.665 | 150.183 | 108.197 |
CAR15 | Developing grain, bracts removed (15 DPA) | 67.2152 | 64.4228 | 59.0281 | 127.557 |
CDS Structure of MLOC_57634
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57634.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g27190.1 |
-3 |
6e-70 |
226 |
119/133 (89%) |
13110.m02328 protein 40S ribosomal protein S17, putative, expressed |
TAIR PP10 |
AT5G04800.4 |
-3 |
2e-57 |
192 |
98/137 (72%) |
Ribosomal S17 family protein | chr5:1389217-1389642 FORWARD LENGTH=141 |