MLOC_57599 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.219910.880210.863912.0795
LEAShoots from the seedlings (10 cm shoot stage)10.26372.997133.531214.93241
INF1Young developing inflorescences (5mm)61.584267.469359.76961.5434
INF2Developing inflorescences (1-1.5 cm)62.962763.038355.643875.167
ROORoots from the seedlings (10 cm shoot stage)5.488637.840739.5502810.2383
NODDeveloping tillers at six leaf stage, 3rd internode11.567114.060512.295848.6373
CAR5Developing grain, bracts removed (5 DPA)4.693685.453325.114945.65307
CAR15Developing grain, bracts removed (15 DPA)0.7259940.468140.7312221.636



CDS Structure of MLOC_57599






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57599.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360315NoneNoneNoneNone
MLOC_57599.2CUST_3788_PI427708080AvailableAvailablecontig_41905 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g44090.1 -2 0.0 1013 522/588 (89%) 13112.m04655 protein leucine-rich repeat family protein, putative, expressed
TAIR PP10 AT5G62710.1 -2 0.0 706 370/585 (63%) Leucine-rich repeat protein kinase family protein | chr5:25187438-25190325 FORWARD LENGTH=604