- Predicted Gene MLOC_57586
MLOC_57586 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.8915 | 16.2173 | 15.8516 | 14.1016 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.7471 | 23.4582 | 21.9789 | 17.9219 |
| INF1 | Young developing inflorescences (5mm) | 19.9158 | 20.7261 | 21.0693 | 16.4621 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.6467 | 25.2353 | 24.5088 | 25.4289 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.8607 | 25.4403 | 22.8395 | 28.2946 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 16.2582 | 18.8662 | 20.8739 | 59.2473 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.4809 | 22.5658 | 25.3234 | 21.1771 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 31.0256 | 28.6053 | 26.118 | 63.4193 |
CDS Structure of MLOC_57586
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57586.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g36994.1 |
-2 |
0.0 |
1365 |
673/763 (88%) |
13108.m03891 protein protein transport protein, putative, expressed |
| TAIR PP10 |
AT2G21630.1 |
-2 |
0.0 |
1019 |
512/765 (67%) |
Sec23/Sec24 protein transport family protein | chr2:9250346-9253829 FORWARD LENGTH=761 |
