MLOC_57582 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.2564823.816518.191320.2551
LEAShoots from the seedlings (10 cm shoot stage)19.615517.440715.795214.5887
INF1Young developing inflorescences (5mm)31.337626.806920.325.4011
INF2Developing inflorescences (1-1.5 cm)31.617228.123324.290435.244
ROORoots from the seedlings (10 cm shoot stage)7.6733913.68347.2312415.56
NODDeveloping tillers at six leaf stage, 3rd internode6.0145910.12864.5499623.2281
CAR5Developing grain, bracts removed (5 DPA)42.448834.878538.072343.6183
CAR15Developing grain, bracts removed (15 DPA)15.5913.264612.513738.3082



CDS Structure of MLOC_57582






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57582.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57582.1CUST_7935_PI427708083AvailableAvailablecontig_41888 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g36940.2 -2 5e-44 166 126/212 (59%) 13107.m03795 protein eukaryotic translation initiation factor 4G, putative, expressed
TAIR PP10None-----