- Predicted Gene MLOC_57581
MLOC_57581 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57581_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57581_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 30.3329 | 52.8158 | 50.0571 | 48.0111 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 52.0946 | 40.447 | 37.668 | 39.4839 |
INF1 | Young developing inflorescences (5mm) | 77.5596 | 70.225 | 57.8739 | 58.0039 |
INF2 | Developing inflorescences (1-1.5 cm) | 61.5385 | 64.4753 | 57.4116 | 68.3168 |
ROO | Roots from the seedlings (10 cm shoot stage) | 20.6288 | 42.0189 | 30.0081 | 49.5538 |
NOD | Developing tillers at six leaf stage, 3rd internode | 29.099 | 30.3136 | 26.2457 | 109.04 |
CAR5 | Developing grain, bracts removed (5 DPA) | 99.2243 | 88.0692 | 96.4498 | 92.235 |
CAR15 | Developing grain, bracts removed (15 DPA) | 40.8666 | 38.2857 | 38.3449 | 88.0624 |
CDS Structure of MLOC_57581
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57581.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g36940.2 |
-1 |
0.0 |
1600 |
997/1613 (62%) |
13107.m03795 protein eukaryotic translation initiation factor 4G, putative, expressed |
TAIR PP10 |
AT3G60240.2 |
-1 |
0.0 |
798 |
540/1216 (44%) |
| Symbols: EIF4G, CUM2 | eukaryotic translation initiation factor 4G | chr3:22261842-22268295 FORWARD LENGTH=1723 |