- Predicted Gene MLOC_57578
MLOC_57578 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 271.321 | 196.563 | 214.222 | 227.558 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 142.61 | 98.3976 | 125.522 | 106.414 |
| INF1 | Young developing inflorescences (5mm) | 135.162 | 141.25 | 147.809 | 122.005 |
| INF2 | Developing inflorescences (1-1.5 cm) | 111.014 | 130.294 | 130.328 | 137.468 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 260.311 | 220.016 | 202.048 | 282.528 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 232.421 | 243.648 | 132.186 | 716.22 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 163.532 | 165.731 | 156.196 | 163.707 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 33.2175 | 30.344 | 29.7472 | 76.9997 |
CDS Structure of MLOC_57578
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57578.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g38630.2 |
+2 |
1e-104 |
313 |
180/182 (99%) |
13105.m04057 protein ras-related protein, putative, expressed |
| TAIR PP10 |
AT3G46060.3 |
+2 |
7e-99 |
297 |
171/183 (93%) |
| Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917908-16919740 FORWARD LENGTH=216 |