MLOC_57576 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2416090.28800900.357904
LEAShoots from the seedlings (10 cm shoot stage)2.036175.784635.836864.2677
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)8.36063.202263.285664.94154
NODDeveloping tillers at six leaf stage, 3rd internode0.5443610.384581.455062.02049
CAR5Developing grain, bracts removed (5 DPA)0.1388340.2921240.1038280.225685
CAR15Developing grain, bracts removed (15 DPA)0.08429090.03181080.1211390.194512



CDS Structure of MLOC_57576






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57576.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57576.1CUST_13716_PI427708080AvailableAvailablecontig_41880 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g41450.1 -3 2e-18 84 66/152 (43%) 13106.m04327 protein VQ domain containing protein, putative, expressed
TAIR PP10None-----