- Predicted Gene MLOC_57554
MLOC_57554 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.7334 | 38.0715 | 35.2657 | 38.5122 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.3461 | 40.0251 | 38.543 | 36.6995 |
| INF1 | Young developing inflorescences (5mm) | 98.2509 | 89.9432 | 82.1205 | 83.3243 |
| INF2 | Developing inflorescences (1-1.5 cm) | 83.0839 | 83.727 | 81.7633 | 101.946 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.5326 | 39.1036 | 31.545 | 51.8819 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.9449 | 7.01504 | 18.469 | 37.9922 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 85.1176 | 84.3742 | 92.4383 | 96.7322 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 20.1537 | 22.6968 | 18.0104 | 50.7552 |
CDS Structure of MLOC_57554
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57554.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g52960.1 |
-2 |
4e-84 |
288 |
143/205 (70%) |
13104.m05444 protein nucleolin, putative, expressed |
| TAIR PP10 |
AT1G48920.1 |
-2 |
1e-56 |
205 |
115/212 (54%) |
| Symbols: ATNUC-L1, PARL1, NUC-L1 | nucleolin like 1 | chr1:18098186-18101422 FORWARD LENGTH=557 |