MLOC_57544 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.282328.568829.456731.247
LEAShoots from the seedlings (10 cm shoot stage)20.131913.016723.079814.8248
INF1Young developing inflorescences (5mm)0.3811740.2080020.4081080.295491
INF2Developing inflorescences (1-1.5 cm)0.4557780.3368981.212990.678166
ROORoots from the seedlings (10 cm shoot stage)32.793924.100817.63326.0226
NODDeveloping tillers at six leaf stage, 3rd internode25.686938.873826.104692.9491
CAR5Developing grain, bracts removed (5 DPA)1.939362.252332.063992.12945
CAR15Developing grain, bracts removed (15 DPA)1.365661.546671.063673.49906



CDS Structure of MLOC_57544






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57544.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366402NoneNoneNoneNone
MLOC_57544.1CUST_3781_PI427708080AvailableAvailablecontig_41854 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g11910.1 +3 0.0 624 289/356 (81%) 13105.m01290 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G45910.1 +3 6e-99 306 155/344 (45%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:18620420-18622264 REVERSE LENGTH=372