- Predicted Gene MLOC_57538
MLOC_57538 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57538_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57538_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.16743 | 2.97495 | 2.7069 | 2.45209 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.71557 | 3.02083 | 2.72235 | 2.72584 |
INF1 | Young developing inflorescences (5mm) | 10.3509 | 10.6798 | 11.4085 | 8.71907 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.4976 | 11.8612 | 11.2021 | 12.831 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.700628 | 1.8722 | 1.90171 | 2.09868 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.12253 | 0.127267 | 0.455106 | 0.604628 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.17513 | 6.02529 | 5.97422 | 5.8051 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.17447 | 2.36854 | 2.35384 | 5.16373 |
CDS Structure of MLOC_57538
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57538.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g19570.1 |
-2 |
0.0 |
766 |
456/872 (52%) |
13103.m02343 protein fip1 motif family protein, expressed |
TAIR PP10 |
AT5G58040.1 |
-2 |
4e-21 |
100 |
125/509 (25%) |
| Symbols: ATFIP1[V], FIPS5, ATFIPS5, FIP1[V] | homolog of yeast FIP1 [V] | chr5:23488865-23494000 FORWARD LENGTH=1196 |