MLOC_57525 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.242553.100213.117742.80543
LEAShoots from the seedlings (10 cm shoot stage)3.484131.950071.66572.03955
INF1Young developing inflorescences (5mm)7.767088.33478.100146.57266
INF2Developing inflorescences (1-1.5 cm)9.279629.872258.8958310.0907
ROORoots from the seedlings (10 cm shoot stage)2.122123.367622.636653.69546
NODDeveloping tillers at six leaf stage, 3rd internode3.17624.491954.5972514.6299
CAR5Developing grain, bracts removed (5 DPA)7.666837.364237.383517.12577
CAR15Developing grain, bracts removed (15 DPA)1.48091.434142.000673.39723



CDS Structure of MLOC_57525






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57525.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57525.3CUST_7922_PI427708083AvailableAvailablecontig_41835 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g39200.3 -1 7e-47 184 122/275 (44%) 13110.m03586 protein expressed protein
TAIR PP10None-----