MLOC_57522 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6810070.9170430.2393041.24472
LEAShoots from the seedlings (10 cm shoot stage)0.84749800.6817741.51648
INF1Young developing inflorescences (5mm)0.7726770.1549961.344891.07715
INF2Developing inflorescences (1-1.5 cm)1.279631.027841.032752.30002
ROORoots from the seedlings (10 cm shoot stage)0.5624260.6498421.59351.6345
NODDeveloping tillers at six leaf stage, 3rd internode2.110660.9986470.6234629.7759
CAR5Developing grain, bracts removed (5 DPA)0.6225321.405310.6872891.89224
CAR15Developing grain, bracts removed (15 DPA)00.1715160.2464231.87358



CDS Structure of MLOC_57522






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354022
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354022CUST_23646_PI427708080NoneNoneNone
MLOC_1089.1NoneAvailableNonecontig_109193 (Not mapped)
MLOC_32070.1NoneAvailableNonecontig_2249708 (Not mapped)
MLOC_32324.1NoneAvailableNonecontig_2276088 (Not mapped)
MLOC_57522.1NoneAvailableAvailablecontig_418290 (Not mapped)
MLOC_77737.1NoneAvailableNonecontig_770463 (Not mapped)
MLOC_79394.2NoneAvailableNonecontig_84824 (Mapped)
MLOC_80241.1NoneAvailableNonecontig_894158 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----