MLOC_57500 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.427031.046811.141631.20828
LEAShoots from the seedlings (10 cm shoot stage)0.04453710.05358070.1038240.0584711
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.663932.020191.091532.28771
NODDeveloping tillers at six leaf stage, 3rd internode1.074280.9309134.204725.0641
CAR5Developing grain, bracts removed (5 DPA)00.027202500.0381484
CAR15Developing grain, bracts removed (15 DPA)0.0210695000.0731834



CDS Structure of MLOC_57500






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57500.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57500.1CUST_13702_PI427708080AvailableAvailablecontig_41802 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g55040.1 +2 0.0 652 316/440 (72%) 13103.m05979 protein UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
TAIR PP10 AT3G02100.1 +2 5e-112 343 182/452 (40%) UDP-Glycosyltransferase superfamily protein | chr3:368840-370484 REVERSE LENGTH=464