MLOC_57482 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.478028.054626.991586.08452
LEAShoots from the seedlings (10 cm shoot stage)4.985882.761163.461083.06921
INF1Young developing inflorescences (5mm)18.45816.895714.989712.8548
INF2Developing inflorescences (1-1.5 cm)12.923112.946611.340712.5632
ROORoots from the seedlings (10 cm shoot stage)2.589646.117684.496175.85799
NODDeveloping tillers at six leaf stage, 3rd internode0.2263510.1660290.4762970.70461
CAR5Developing grain, bracts removed (5 DPA)9.017349.1760510.3378.28125
CAR15Developing grain, bracts removed (15 DPA)2.134921.594581.822583.82872



CDS Structure of MLOC_57482






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57482.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57482.2CUST_13698_PI427708080AvailableAvailablecontig_41781 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g72780.1 -1 0.0 745 476/736 (65%) 13101.m07932 protein expressed protein
TAIR PP10 AT4G23540.1 -1 1e-122 258 202/626 (32%) ARM repeat superfamily protein | chr4:12280547-12286420 REVERSE LENGTH=1131