- Predicted Gene MLOC_57482
MLOC_57482 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57482_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57482_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.47802 | 8.05462 | 6.99158 | 6.08452 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.98588 | 2.76116 | 3.46108 | 3.06921 |
INF1 | Young developing inflorescences (5mm) | 18.458 | 16.8957 | 14.9897 | 12.8548 |
INF2 | Developing inflorescences (1-1.5 cm) | 12.9231 | 12.9466 | 11.3407 | 12.5632 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.58964 | 6.11768 | 4.49617 | 5.85799 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.226351 | 0.166029 | 0.476297 | 0.70461 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.01734 | 9.17605 | 10.337 | 8.28125 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.13492 | 1.59458 | 1.82258 | 3.82872 |
CDS Structure of MLOC_57482
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57482.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g72780.1 |
-1 |
0.0 |
745 |
476/736 (65%) |
13101.m07932 protein expressed protein |
TAIR PP10 |
AT4G23540.1 |
-1 |
1e-122 |
258 |
202/626 (32%) |
ARM repeat superfamily protein | chr4:12280547-12286420 REVERSE LENGTH=1131 |