- Predicted Gene MLOC_57476
MLOC_57476 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.61256 | 4.13929 | 3.63611 | 3.53764 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.34071 | 2.71826 | 4.14375 | 2.95861 |
| INF1 | Young developing inflorescences (5mm) | 8.55402 | 10.2575 | 9.10128 | 7.29375 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.18848 | 9.74726 | 10.3901 | 9.76078 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.12344 | 4.15059 | 4.4446 | 4.38226 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.35193 | 6.0673 | 7.35447 | 19.2275 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.2746 | 6.88008 | 7.29801 | 6.28328 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.805689 | 1.01723 | 1.0813 | 1.99255 |
CDS Structure of MLOC_57476
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57476.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g22450.1 |
-1 |
4e-153 |
453 |
248/327 (76%) |
13103.m02702 protein auxin response factor 75, putative, expressed |
| TAIR PP10 |
AT3G05480.3 |
-1 |
1e-115 |
357 |
214/500 (43%) |
| Symbols: RAD9 | cell cycle checkpoint control protein family | chr3:1585383-1588238 FORWARD LENGTH=456 |