- Predicted Gene MLOC_57475
MLOC_57475 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1606.67 | 1193.66 | 1106.39 | 1296.23 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 597.736 | 522.362 | 476.568 | 446.773 |
| INF1 | Young developing inflorescences (5mm) | 2321.16 | 2429.93 | 2279.41 | 2021.76 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1486.39 | 1645.51 | 1579.97 | 1679.06 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1157.3 | 1284.49 | 1396.3 | 1487.58 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 138.738 | 102.964 | 198.306 | 378.872 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1054.35 | 1052.65 | 1023.37 | 992.709 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 367.369 | 347.438 | 297.479 | 784.345 |
CDS Structure of MLOC_57475
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57475.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g46490.1 |
+3 |
2e-49 |
158 |
75/81 (93%) |
13103.m05006 protein 40S ribosomal protein S21, putative, expressed |
| TAIR PP10 |
AT5G27700.1 |
+3 |
2e-42 |
139 |
63/81 (78%) |
Ribosomal protein S21e | chr5:9807541-9808048 REVERSE LENGTH=82 |