MLOC_5747 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.58583 | 24.6809 | 20.6706 | 16.8174 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.0532 | 20.5239 | 20.9338 | 16.7189 |
| INF1 | Young developing inflorescences (5mm) | 27.3099 | 28.3596 | 28.0921 | 20.589 |
| INF2 | Developing inflorescences (1-1.5 cm) | 27.6363 | 29.9287 | 30.9449 | 28.1838 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.27562 | 19.8684 | 12.4337 | 19.1774 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.2123 | 12.758 | 11.9916 | 38.203 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 27.9474 | 25.1831 | 27.6487 | 22.5679 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 28.3505 | 25.0241 | 26.2197 | 52.219 |
CDS Structure of MLOC_5747
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5747.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g11470.1 |
+1 |
0.0 |
1588 |
797/861 (93%) |
13103.m01294 protein DEAD/DEAH box helicase domain containing protein, expressed |
| TAIR PP10 |
AT5G61140.2 |
+1 |
0.0 |
1726 |
841/1039 (81%) |
U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2157 |