- Predicted Gene MLOC_57456
MLOC_57456 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.05237 | 2.77755 | 2.37726 | 2.41204 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.59894 | 5.39741 | 5.73699 | 4.36163 |
| INF1 | Young developing inflorescences (5mm) | 11.5764 | 11.0241 | 10.6011 | 8.85374 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.9533 | 10.5637 | 11.6855 | 11.6318 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.74095 | 2.96711 | 2.87787 | 3.20868 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.08777 | 2.34585 | 5.01744 | 9.00784 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.27703 | 5.29729 | 5.48222 | 4.84998 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.2139 | 1.18932 | 1.17665 | 2.59424 |
CDS Structure of MLOC_57456
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57456.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g41770.1 |
-3 |
0.0 |
939 |
496/709 (70%) |
13110.m03904 protein expressed protein |
| TAIR PP10 |
AT1G78540.1 |
-3 |
7e-144 |
444 |
249/634 (39%) |
| Symbols: SHB, ATSHB, STATLB | SH2 domain protein B | chr1:29541244-29544574 REVERSE LENGTH=668 |