MLOC_5745 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.068696.993427.339127.33544
LEAShoots from the seedlings (10 cm shoot stage)7.9758410.611715.202210.4257
INF1Young developing inflorescences (5mm)16.33329.982627.7437510.1674
INF2Developing inflorescences (1-1.5 cm)5.112774.535126.780466.02448
ROORoots from the seedlings (10 cm shoot stage)7.2799.246618.8903111.9053
NODDeveloping tillers at six leaf stage, 3rd internode11.64168.957637.2155931.1453
CAR5Developing grain, bracts removed (5 DPA)8.788967.008456.45497.58809
CAR15Developing grain, bracts removed (15 DPA)1.912282.32631.910355.05553



CDS Structure of MLOC_5745






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_5745.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251566.1NoneNoneNoneNone
MLOC_5745.4CUST_18159_PI427708080AvailableAvailablecontig_136627 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g15770.3 +1 0.0 635 320/390 (82%) 13103.m01851 protein tyrosine protein kinase domain containing protein, putative, expressed
TAIR PP10 AT3G09010.1 +1 8e-149 442 223/365 (61%) Protein kinase superfamily protein | chr3:2750285-2752086 FORWARD LENGTH=393