- Predicted Gene MLOC_57439
MLOC_57439 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.273232 | 0.122397 | 0.28862 |
| INF1 | Young developing inflorescences (5mm) | 0.139614 | 0.0723549 | 0 | 0.107732 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.12713 | 0.0595154 | 0.0854155 | 0.108483 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.15074 | 0.169939 | 0.950247 | 0.346092 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.119725 | 0.0344874 | 0.136189 | 0.210377 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 353.781 | 326.938 | 343.629 | 368.519 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 18.5148 | 21.2601 | 29.2551 | 57.0825 |
CDS Structure of MLOC_57439
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57439.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g45470.1 |
-1 |
2e-57 |
192 |
89/125 (71%) |
13104.m04561 protein vacuolar-processing enzyme precursor, putative, expressed |
| TAIR PP10 |
AT4G32940.1 |
-1 |
2e-38 |
139 |
61/123 (50%) |
| Symbols: GAMMA-VPE, GAMMAVPE | gamma vacuolar processing enzyme | chr4:15900557-15903161 REVERSE LENGTH=494 |