MLOC_57438 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2153630.4345930.290590.256708
LEAShoots from the seedlings (10 cm shoot stage)0.07002090.3731840.3748570.174879
INF1Young developing inflorescences (5mm)0.07298210.038795900.0470492
INF2Developing inflorescences (1-1.5 cm)00.0304280.04249130.0505921
ROORoots from the seedlings (10 cm shoot stage)0.0777120.043514400.0813407
NODDeveloping tillers at six leaf stage, 3rd internode0.4481720.3562470.4528270.921675
CAR5Developing grain, bracts removed (5 DPA)0.2481110.5613980.4416530.305101
CAR15Developing grain, bracts removed (15 DPA)0.036090100.1568720.156084



CDS Structure of MLOC_57438






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57438.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57438.1NoneAvailableAvailablecontig_41751 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g43000.1 +1 3e-20 93 79/105 (75%) 13102.m04768 protein cysteine-rich repeat secretory protein 15 precursor, putative, expressed
TAIR PP10None-----