- Predicted Gene MLOC_57434
MLOC_57434 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.72085 | 3.53229 | 3.91823 | 4.24741 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 16.2402 | 5.39532 | 4.59742 | 7.26487 |
| INF1 | Young developing inflorescences (5mm) | 1.2067 | 0.325852 | 0.230892 | 0.53379 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.864588 | 0.672367 | 1.15968 | 1.1583 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.88989 | 2.9832 | 2.69165 | 3.95181 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.1244 | 11.2775 | 5.66865 | 27.2359 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.5083 | 15.8711 | 10.6805 | 17.4125 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.33622 | 1.38177 | 1.27922 | 3.95857 |
CDS Structure of MLOC_57434
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57434.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g58350.1 |
-2 |
4e-54 |
182 |
99/139 (71%) |
13103.m06410 protein OsIAA14 - Auxin-responsive Aux/IAA gene family member, expressed |
| TAIR PP10 |
AT1G04240.1 |
-2 |
2e-33 |
125 |
68/140 (49%) |
| Symbols: SHY2, IAA3 | AUX/IAA transcriptional regulator family protein | chr1:1128564-1129319 REVERSE LENGTH=189 |