MLOC_57429 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.662912.54792.616432.712
LEAShoots from the seedlings (10 cm shoot stage)2.057041.379582.301591.65017
INF1Young developing inflorescences (5mm)2.072232.197362.435572.228
INF2Developing inflorescences (1-1.5 cm)1.233741.767531.560811.8737
ROORoots from the seedlings (10 cm shoot stage)4.573713.288344.234854.12539
NODDeveloping tillers at six leaf stage, 3rd internode5.855176.705612.597620.7854
CAR5Developing grain, bracts removed (5 DPA)3.245214.602863.247494.13375
CAR15Developing grain, bracts removed (15 DPA)0.615250.5849270.6282971.75599



CDS Structure of MLOC_57429






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57429.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363713NoneNoneNoneNone
MLOC_57429.1CUST_3766_PI427708080AvailableAvailablecontig_41743 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g41580.1 -2 2e-42 158 183/305 (60%) 13110.m03882 protein protein binding protein, putative, expressed
TAIR PP10None-----