- Predicted Gene MLOC_57427
MLOC_57427 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57427_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57427_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0344308 | 0.113512 | 0.128024 | 0.120714 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.107695 | 0 | 0 | 0.131533 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.0607494 | 0 | 0 | 0.0357383 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0 | 0 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.530446 | 0.696898 | 0.434864 | 0.58355 |
CAR15 | Developing grain, bracts removed (15 DPA) | 163.057 | 180.615 | 149.261 | 413.781 |
CDS Structure of MLOC_57427
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57427.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g29840.1 |
+1 |
3e-61 |
207 |
106/187 (57%) |
13101.m03094 protein no apical meristem protein, putative, expressed |
TAIR PP10 |
AT5G39610.1 |
+1 |
5e-60 |
202 |
108/205 (53%) |
| Symbols: ATNAC2, ORE1, ANAC092, ATNAC6, NAC2, NAC6 | NAC domain containing protein 6 | chr5:15858591-15859650 REVERSE LENGTH=285 |