MLOC_57423 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.094156.168345.924576.24274
LEAShoots from the seedlings (10 cm shoot stage)9.797821.568122.47563.85929
INF1Young developing inflorescences (5mm)1.681751.009941.144031.17274
INF2Developing inflorescences (1-1.5 cm)0.5736670.7913920.5716770.786701
ROORoots from the seedlings (10 cm shoot stage)8.361835.446077.41487.21996
NODDeveloping tillers at six leaf stage, 3rd internode6.087934.490282.2784910.9252
CAR5Developing grain, bracts removed (5 DPA)3.41063.53443.376953.64123
CAR15Developing grain, bracts removed (15 DPA)0.2933830.3241940.4519050.902264



CDS Structure of MLOC_57423






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57423.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368864NoneNoneNoneNone
MLOC_57423.1CUST_3763_PI427708080AvailableAvailablecontig_41737 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g46995.1 -2 0.0 698 432/564 (77%) 13106.m10470 protein armadillo/beta-catenin repeat family protein, putative, expressed
TAIR PP10 AT1G61350.1 -2 5e-80 275 199/563 (35%) ARM repeat superfamily protein | chr1:22634099-22635820 FORWARD LENGTH=573