- Predicted Gene MLOC_57406
MLOC_57406 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_57406_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_57406_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 198.734 | 142.783 | 159.395 | 154.266 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 88.2044 | 77.4625 | 101.248 | 71.4193 |
INF1 | Young developing inflorescences (5mm) | 80.5001 | 79.9844 | 88.5373 | 68.336 |
INF2 | Developing inflorescences (1-1.5 cm) | 51.944 | 56.2857 | 60.8956 | 58.5781 |
ROO | Roots from the seedlings (10 cm shoot stage) | 177.191 | 126.855 | 126.498 | 150.417 |
NOD | Developing tillers at six leaf stage, 3rd internode | 196.865 | 157.566 | 142.283 | 452.132 |
CAR5 | Developing grain, bracts removed (5 DPA) | 80.8155 | 79.9315 | 79.7377 | 75.365 |
CAR15 | Developing grain, bracts removed (15 DPA) | 42.1993 | 43.9494 | 43.851 | 96.2535 |
CDS Structure of MLOC_57406
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57406.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g62244.1 |
+1 |
3e-96 |
288 |
145/153 (95%) |
13101.m06659 protein ubiquitin-conjugating enzyme, putative, expressed |
TAIR PP10 |
AT3G46460.1 |
+1 |
1e-88 |
268 |
131/152 (86%) |
| Symbols: UBC13 | ubiquitin-conjugating enzyme 13 | chr3:17096120-17097315 REVERSE LENGTH=166 |