MLOC_57397 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.452714.394464.434694.41162
LEAShoots from the seedlings (10 cm shoot stage)2.222960.1700230.5031710.756322
INF1Young developing inflorescences (5mm)14.768717.726913.773414.2795
INF2Developing inflorescences (1-1.5 cm)14.63819.539916.521820.3205
ROORoots from the seedlings (10 cm shoot stage)4.96163.898454.56854.37269
NODDeveloping tillers at six leaf stage, 3rd internode2.82223.578922.241588.01492
CAR5Developing grain, bracts removed (5 DPA)2.427742.284432.208872.41077
CAR15Developing grain, bracts removed (15 DPA)0.2201520.06947410.2319960.432253



CDS Structure of MLOC_57397






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57397.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375048NoneNoneNoneNone
MLOC_57397.1CUST_3756_PI427708080AvailableAvailablecontig_41711 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g25450.1 +2 0.0 1018 614/745 (82%) 13110.m02145 protein OsSub60 - Putative Subtilisin homologue, expressed
TAIR PP10 AT2G05920.1 +2 0.0 735 432/670 (64%) Subtilase family protein | chr2:2269831-2272207 REVERSE LENGTH=754