MLOC_5739 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.37592 | 3.49375 | 3.69964 | 3.56027 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.71252 | 3.8368 | 2.83044 | 3.13341 |
| INF1 | Young developing inflorescences (5mm) | 9.21184 | 8.80952 | 9.23514 | 7.94841 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.7616 | 12.4989 | 11.3577 | 13.6791 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.9625 | 3.27393 | 2.22026 | 4.04121 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.04022 | 1.50941 | 2.48904 | 5.67543 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.33402 | 5.37569 | 5.67581 | 5.6622 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.74501 | 1.95834 | 1.42732 | 4.24535 |
CDS Structure of MLOC_5739
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5739.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g04700.1 |
-3 |
0.0 |
1056 |
636/964 (66%) |
13107.m00414 protein MYB family transcription factor, putative, expressed |
| TAIR PP10 |
AT3G18100.1 |
-3 |
9e-135 |
437 |
253/598 (42%) |
| Symbols: MYB4R1, AtMYB4R1 | myb domain protein 4r1 | chr3:6200689-6204583 FORWARD LENGTH=847 |
