- Predicted Gene MLOC_57388
MLOC_57388 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 21.8731 | 18.1466 | 16.5052 | 17.9834 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 18.3564 | 25.447 | 29.9458 | 18.7741 |
INF1 | Young developing inflorescences (5mm) | 21.024 | 22.1499 | 20.1284 | 18.102 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.6464 | 13.3417 | 12.2234 | 14.8476 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.15097 | 10.3015 | 9.48907 | 10.3883 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.52244 | 1.77132 | 6.17684 | 7.45499 |
CAR5 | Developing grain, bracts removed (5 DPA) | 14.9534 | 13.4378 | 14.4487 | 13.7473 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.8973 | 5.63902 | 6.55303 | 14.4511 |
CDS Structure of MLOC_57388
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_57388.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g49890.1 |
-2 |
0.0 |
884 |
458/525 (87%) |
13101.m05193 protein threonine synthase, chloroplast precursor, putative, expressed |
TAIR PP10 |
AT4G29840.1 |
-2 |
0.0 |
708 |
366/477 (77%) |
| Symbols: MTO2, TS | Pyridoxal-5-phosphate-dependent enzyme family protein | chr4:14599434-14601014 REVERSE LENGTH=526 |