MLOC_57382 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4359330.8589850.3993150.696708
LEAShoots from the seedlings (10 cm shoot stage)2.347064.978188.710534.58732
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.0760880.1451720.09557610.134001
ROORoots from the seedlings (10 cm shoot stage)5.231372.221045.250773.63738
NODDeveloping tillers at six leaf stage, 3rd internode0.2130240.1620630.1626730.513621
CAR5Developing grain, bracts removed (5 DPA)3.645122.335593.428223.15368
CAR15Developing grain, bracts removed (15 DPA)3.011993.669352.204777.55313



CDS Structure of MLOC_57382






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_57382.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_57382.1CUST_13687_PI427708080AvailableAvailablecontig_41697 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g55134.1 -2 3e-40 135 65/81 (80%) 13102.m06318 protein cytochrome c oxidase copper chaperone, putative, expressed
TAIR PP10 AT1G53030.1 -2 7e-29 105 48/69 (70%) Cytochrome C oxidase copper chaperone (COX17) | chr1:19760224-19760442 REVERSE LENGTH=72