MLOC_57370 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.265341.927942.526922.49338
LEAShoots from the seedlings (10 cm shoot stage)2.686733.718433.77533.30923
INF1Young developing inflorescences (5mm)3.359394.02696.005223.90632
INF2Developing inflorescences (1-1.5 cm)4.090136.058435.423815.99508
ROORoots from the seedlings (10 cm shoot stage)2.206913.032872.04963.72834
NODDeveloping tillers at six leaf stage, 3rd internode4.203813.574013.9864115.128
CAR5Developing grain, bracts removed (5 DPA)1.401572.001642.354792.02663
CAR15Developing grain, bracts removed (15 DPA)0.9669171.039710.7596652.30311



CDS Structure of MLOC_57370






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK372284
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372284CUST_14347_PI427708083NoneNoneNone
MLOC_22152.1NoneAvailableNonecontig_160309 (Mapped)
MLOC_29285.1NoneAvailableNonecontig_1991571 (Not mapped)
MLOC_48278.1NoneAvailableNonecontig_320567 (Mapped)
MLOC_53042.3NoneAvailableNonecontig_380102 (Not mapped)
MLOC_56484.1NoneAvailableNonecontig_408810 (Not mapped)
MLOC_57370.2NoneAvailableAvailablecontig_41692 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----